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Bibliography Jon Brodie

Link to Jon’s staff profile

In press / preparation:

  • Bohnet, I., Brodie, J. and Bartley, R. In press. Assessing water quality of community defined land use change scenarios for the Douglas Shire, Far North Queensland. Chapter in: Landscape Analysis and Visualisation: Spatial Models for Natural Resource Management and Planning, Springer-Verlag.

  • Brodie, J.E., Tong, S.L. and Devlin, M.J.(Eds) ASEAN Marine Water Quality Criteria Marine Monitoring Manual. In press.

  • Brodie, J., Lewis, S., Bainbridge, Z., Pearson, R., Waterhouse, J. and Prange, J. In press. Marine and Tropical Sciences Research Facility GBR catchments and lagoon research synthesis report. Report to the Minister of Environment and Water Resources on behalf of the Marine and Tropical Sciences Research facility.

  • Brodie J. and Fabricius K., In press. Terrestrial runoff to the Great Barrier Reef and the implications for its long-term ecological status. In: P. Hutchings, M. Kingsford and O. Hoegh-Guldberg (Eds.), Field Guide to the Great Barrier Reef. Australian Coral Reef Society.

  • Honchin, C., Grey, L., Brodie, J., Haynes, D. and Moss, A. In review. Water Quality Guidelines for the Great Barrier Reef Marine Park. Great Barrier Reef Marine Park Authority, Townsville.

  • Shaw C., Muller J. and Brodie J., in review. Phytotoxicity induced by chemicals from flood waters within the Great Barrier Reef Lagoon.

2008:

Faithful JW, Liessmann L, Brodie JE, Ledee E, Maughan M & Sydes D, 2008. Water Quality Characteristics of Water Draining Different Land Uses in the Tully/Murray Rivers Region. ACTFR report no. 08/03. Australian Centre for Tropical Freshwater Research, James Cook University, Townsville.

Fuller, D., Lovell, B., Fung, K., Jeffery, R., Brulliard, C., Pechey, L., Anthon, S., Baker, S., Hart, B., Brodie, J. 2008. The need for and cost benefit of a pesticide reporting system in the Great Barrier Reef catchment region. Report from URS to DEWHA. 159 pp.

Maughan M., Brodie J. and Waterhouse J., 2008. What river impact this reef? A simple reef exposure model. In: Martin Lambert, Trevor Daniell & Michael Leonard (eds): Proceedings of Water Down Under 2008, incorporating 31 st Hydrology and Water Resources Symposium and 4 th International Conference on Water Resources and Environment Research, Adelaide 14-17 April 2008, Adelaide, 1912-1923.

2007:

Bainbridge, Z., Lewis, S. and Brodie, J. 2007. Sediment and nutrient exports for the Burdekin River catchment, north Queensland: A comparison of monitoring and modelling data. In: MODSIM 2007 International Congress on Modelling and Simulation. Modelling and Simulation Society of Australia and New Zealand, 10-13th December 2007, 874-880.

Bainbridge ZT, Lewis SE & Brodie JE, 2007. Event-Based Community Water Quality Monitoring in the Burdekin Dry Tropics Region: 2002-2007 Volume 1: 2006/07 wet season report & volume 2: Integrated Wet Season (2002/2007) Report. ACTFR report no. 07/22, Australian Centre for Tropical Freshwater Research, James Cook University, Townsville.

Bohnet, I., Brodie, J., and Bartley, R. 2007. Assessing water quality of community defined land use change scenarios for the Douglas Shire, North Queensland. Place and Purpose conference Bendigo, Australia. Conference proceedings on CD-Rom 4 pp.

Brodie J. (comp), 2007. Nutrient management zones in the Great Barrier Reef Catchment: A decision system for zone selection. Report to the Department of the Environment and Heritage (1MB) (Appendices - 2MB). ACTFR report no. 06/07, Australian Centre for Tropical Freshwater Research, James Cook University, Townsville.

Brodie JE, Lewis SE & McCulloch MT, 2007. Connectivity and Risk: tracing of materials from the upper catchment to the reef. In: Marine and Tropical Sciences Research Facility 8th June 2007 Milestone Report Project 3.7.2. (Milestone 3) 1 - 13. Reef and Rainforest Research Centre.

Brodie J., Mitchell A., Lewis S., Bainbridge Z., Faithful J., M., Hateley L., Armour J., Maughan M. and Reghenzani J., 2007. Water Quality Issues in the Tully Region. ACTFR report no. 07/04, Australian Centre for Tropical Freshwater Research, James Cook University, Townsville.

Brodie J., De'ath G., Devlin M., Furnas M. and Wright M., 2007. Spatial and temporal patterns of near-surface chlorophyll a in the Great Barrier Reef lagoon. Marine and Freshwater Research 58, 342-353.

Brodie J., Butler B., Pearson R. and Bainbridge Z., 2007. Water Quality Monitoring in Queensland Catchments. ACTFR report no. 07/08, Australian Centre for Tropical Freshwater Research, James Cook University, Townsville.

Brodie J., Bainbridge Z. and Lewis S., 2007. Tully/Murray Water Quality Monitoring Strategy. ACTFR report no. 07/18, Australian Centre for Tropical Freshwater Research, James Cook University, Townsville.

Dight I, Brodie JE, Bainbridge ZT & Lewis SE (2007. Environmental Values and Water Quality Objectives for the Estuarine and Coastal Areas of the Lower Burdekin Region. ACTFR report no. 07/23. Australian Centre for Tropical Freshwater Research, James Cook University, Townsville.

Faithful J., Brodie J., Hooper A., Leahy P., Henry G., Finlayson W. and Green D., 2007. Plot-Scale Runoff of Nutrients and Sediments under Varying Management Regimes on a Banana and Cane Farm in the Wet Tropics, Queensland. ACTFR report no. 07/10 or 05/03, Australian Centre for Tropical Freshwater Research, James Cook University, Townsville.

Hately L.R., Armour J.D., Brodie J., Faithful J., Pitt G.L., and Nelson P.N., 2007. Modelling, monitoring and sediment tracing in the Tully river catchment, North Queensland: a comparison of techniques. In: MODSIM 2007 International Congress on Modelling and Simulation. Modelling and Simulation Society of Australia and New Zealand, 10-13th December 2007, 867-873.

Haynes, D., Brodie, J., Waterhouse, J., Bainbridge, Z., Bass, D. and Hart, B. 2007. Assessment of the water quality and ecosystem health of the Great Barrier Reef (Australia): Conceptual models. Environmental Management. 40, 993-1003

Lewis, S., Bainbridge, Z. and Brodie, J. 2007. A review of load tools available for calculating pollutant exports to the Great Barrier Reef lagoon: A case study of varying catchment areas. In: MODSIM 2007 International Congress on Modelling and Simulation. Modelling and Simulation Society of Australia and New Zealand, 10-13th December 2007, 2396-2402.

Lewis S., Davis A., Brodie J., Bainbridge Z., and Maughan M., 2007. Pesticides in the lower Burdekin and Don River catchments. ACTFR report no. 07/05, Australian Centre for Tropical Freshwater Research, James Cook University, Townsville.

Maughan M., Brodie J. and Waterhouse J., 2007. Reef exposure model for the Great Barrier Reef Lagoon. ACTFR report no. 07/19, Australian Centre for Tropical Freshwater Research, James Cook University, Townsville.

Mitchell A., Lewis S., Brodie J., Bainbridge Z. and Maughan M., 2007. Water Quality Issues in the Burdekin Region. ACTFR report no. 07/03, Australian Centre for Tropical Freshwater Research, James Cook University, Townsville.

Mitchell A., Brodie J. and Faithful J., 2007. Testing Simple Sediment and Nutrient Measurement Methods for Landholder Use. ACTFR Report no. 07/06, Australian Centre for Tropical Freshwater Research, James Cook University, Townsville.

Lewis S., Davis A., Brodie J., Bainbridge Z., McConnell V. and Maughan M., 2007. Pesticides in the lower Burdekin and Don River catchments. ACTFR report no. 07/05, Australian Centre for Tropical Freshwater Research, James Cook University, Townsville.

Liessmann L, Lewis S., Bainbridge Z., Brodie J., Faithful J. and Maughan M., 2007. Event-based Water Quality Monitoring of the Ross and Black River Basins During the 2006/07 Wet Season. ACTFR report no. 07/09, Australian Centre for Tropical Fershwater Research, James Cook University, Townsville.

Sheaves M, Brodie J, Brooke B, Dale P, Lovelock C, Waycott M, Gehrke P, Johnston R, Baker R., 2007. Vulnerability of coastal and estuarine habitats in the GBR to climate change. Chapter 19 In: Johnson, J. and Marshall, P. (Eds.) Assessing Climate Change Vulnerability of the Great Barrier Reef. Great Barrier Reef Marine Park Authority, Townsville. p. 593- 620

Shenton W., Hart B.T. and Brodie J., 2007. Development of a Bayesian Network Model for Linking Management Actions, Nutrient Targets and Ecosystem Condition in the Tully Catchment, North Queensland. LWA/MDBC Project UMO43.

Sherman B., Brodie J., Cogle L., Carroll C., 2007. Appropriate use of catchment models for water quality target setting and land-use management. In: Water Quality and Sediment Behaviour of the Future: Predictions for the 21st Century (Proceedings of Symposium HS2005 at IUGG2007, Perugia, July 2007). IAHS Publ. 314, 2007.

Turak E., Brodie J. and DeVantier L., 2007. Reef-building corals and coral communities of the Yemen Red Sea. Fauna of Arabia 23, 1-40.

2006:

Bainbridge Z., Brodie J., Lewis S., Duncan I., Post D., Faithful J. & Furnas M., 2006. Event based Water Quality Monitoring in the Burdekin Dry Tropics Region - 2004-2005 Wet Season. ACTFR report no. 06/01, Australian Centre for Tropical Freshwater Research, James Cook University, Townsville, 89pp.

Bainbridge Z., Lewis S., Brodie J., Faithful J., Maughan M., Post D., O'Reagain P., Bartley R., Ross S., Schaffelke B., McShane T. and Baynes L., 2006. Monitoring of sediments and nutrients in the Burdekin Dry Tropics Region: 2005/06 wet season. ACTFR report no. 06/13, Australian Centre for Tropical Freshwater Research, James Cook University, Townsville, 97pp.

Brizga, S.O., Brodie, J., Burrows, D., Butler, B, Cappo, M., Lait, R., Pearson, R.J., Pusey, B. and Werren, G.L. 2006. Burdekin Basin draft water resources plan: Phase II – environmental flow assessment framework report. QNRM 06050. Queensland Department of Natural Resources, Mines and Water. 109 p.

Brizga S, Kapitzke IR, Brodie JE, Butler BM, Burrows DW, Cappo M & Dowe JL, 2006. Burdekin Basin Draft Water Resource Plan, Environmental Assessment Report Phase III. Queensland Government: Natural Resources, Mines and Water, Brisbane, 1 – 61.

Brodie J. and Mitchell A., 2006. Sediments and nutrients in north Queensland tropical streams: changes with agricultural development and pristine condition status. CRC Reef Research Centre Technical Report No. 62, CRC Reef Research Centre, Townsville, 140p.

Brodie J., Dekker A.G., Brando V.E., Masters B., Faithful J., Noble R. & Rohde K., 2006. Extent and duration of the algal bloom in the Great Barrier Reef Lagoon following river discharge events in the Mackay Whitsunday Region, Australia. In: Proceedings of the 13th Australasian Remote Sensing and Photogrammetry Conference: Earth Observation - from Science to Solutions, Canberra, November, 2006.

Brodie J., Bainbridge Z. and Lewis S., 2006. Burdekin Water Quality “Modelling” Strategy 2006 for the Burdekin Dry Tropics NRM Water Quality Improvement Plan. ACTFR report no. 06/23, Australian Centre for Tropical Freshwater Research, James Cook University, Townsville.

Brodie J., Bainbridge Z. and Lewis S., 2006. Burdekin Water Quality “Monitoring” Strategy 2006 for the Burdekin Dry Tropics NRM Water Quality Improvement Plan. ACTFR report no. 06/24, Australian Centre for Tropical Freshwater Research, James Cook University, Townsville.

Dougall C., Packett R., Carroll C., Sherman B.S., Read A., Chen Y. and Brodie J., 2006. Sediment and nutrient modelling in the Fitzroy NRM region. Volume 5. In: A.L. Cogle, C. Carroll and B.S. Sherman (eds),The use of SedNet and ANNEX models to guide GBR catchment sediment and nutrient target setting. Department of Natural Resource, Mines and Water, QNRM06138.

Faithful J., Liessmann L., Brodie J., Ledee E., Sydes D. and Maughan M., 2006. Water Quality Characteristics of Water Draining Different Land Uses in the Tully/Murray Rivers Region (Dec 05 – June 06). ACTFR Report no. 06/25, Australian Centre for Tropical Freshwater Research, James Cook University, Townsville.

Fentie B., Esslemont G., Sherman B.S., Searle R, Read A., Chen Y. Brodie J. Wilson P. and Sallaway M., 2006. Sediment and nutrient modelling in the Burnett Mary NRM region. Volume 6. In: A.L. Cogle, C. Carroll and B.S. Sherman (eds),The use of SedNet and ANNEX models to guide GBR catchment sediment and nutrient target setting. Department of Natural Resource, Mines and Water, QNRM06138.

Fentie B., Duncan I., Sherman B.S., Read A., Chen Y., Brodie J. and Cogle A.L., 2006. Sediment and nutrient modelling in the Burdekin NRM region. Volume 3 In: A.L. Cogle, C. Carroll and B.S. Sherman (eds),The use of SedNet and ANNEX models to guide GBR catchment sediment and nutrient target setting. Department of Natural Resource, Mines and Water, QNRM06138.

Hateley L., Armour J., Pitt G., Sherman B., Read A., Chen Y., Brodie J . and Cogle A.L., 2006. Sediment and nutrient modelling in the Far North Queensland NRM region. Volume 2. In: A.L. Cogle, C. Carroll and B.S. Sherman (eds),The use of SedNet and ANNEX models to guide GBR catchment sediment and nutrient target setting. Department of Natural Resource, Mines and Water, QNRM06138.

Kelley R., Barnett B., Bainbridge Z., Brodie J. and Pearson R., 2006. Nutrients, Catchments and Reefs - a gui de to nutrients in your landscape . A publication from the Catchment to Reef Program, a joint initiative of Rainforest CRC and CRC Reef Research Centre ISBN 0 86443 784 6.

Lewis S.E., Brodie J., Ledee E. and Alewijnse M., 2006. The Spatial Extent of Delivery of Terrestrial Materials from the Burdekin Region of the Great Barrier Reef Lagoon. ACTFR report no. 06/02, Australian Centre for Tropical Freshwater Research, James Cook University, Townsville.

Lewis S., Brodie J. and Ledee E., 2006. The Spatial Extent of Delivery of Terrestrial Materials from the Mackay Whitsunday Region in the Great Barrier Reef Lagoon. ACTFR report no. 06/14, Australian Centre for Tropical Freshwater Research, James Cook University, Townsville.

Mitchel A., Furnas M., De'ath G., Brodie J., and Lewis S., 2006. A report into the water quality condition of the Burdekin River and surrounds based on the AIMS end-of-catchmetn sampling program. ACTFR report no. 06/06, Australian Centre for Tropical Freshwater Research, James Cook University, Townsville, 119pp.

Mitchell A., Reghenzani J., Furnas M., De'ath G., Brodie J. and Lewis S., 2006. Nutrients in the Tully River : Spatial and temporal trends. ACTFR report no. 06/10, Australian Centre for Tropical Freshwater Research, James Cook University, Townsville and the Australian Institute of Marine Science, Townsville, 115pp.

Raupach M.R., Schoettker B., Briggs P.R., Lovell J.L., King E.A., Oubelkheir K., Marks A., Brando V.E., Dyce P.A., Dekker A.G., Barrett D.J. and Brodie J., 2006. Use of earth observation to assess land condition and sediment delivery in Great Barrier Reef catchments: A feasibility study. Water for a Healthy Country National Flagship, CSIRO, Canberra.118p.

Rohde K., Masters B., Sherman B., Read A., Chen Y., Brodie J. and Carroll C., 2006. Sediment and nutrient modelling in the Mackay Whitsunday NRM region. Volume 4. In: A.L. Cogle, C. Carroll and B.S. Sherman (eds),The use of SedNet and ANNEX models to guide GBR catchment sediment and nutrient target setting. Department of Natural Resource, Mines and Water, QNRM06138.

Rohde K., Masters B., Brodie J., Faithful J., Noble R., Carroll C., Shaw C. Dekker A. and Brando V., 2006. Fresh and Marine Water quality in the Mackay Whitsunday Region, 2004/2005. Volume 1 Main Report . Volume 2 Appendices. Mackay Whitsunday Natural Resource Management Group, Mackay, Australia.

Wooldridge S., Brodie J. and Furnas M., 2006. Exposure of inner-shelf reefs to nutrient enriched runoff entering the Great Barrier Reef Lagoon: Post-European changes and the design of water quality targets. Marine Pollution Bulletin, 52, 1467-1479.

2005:

Brodie J. and Mitchell A., 2005. Nutrients in Australian tropical rivers: changes with agricultural development and implications for receiving environments. Marine and Freshwater Research 56(3), 279-302.

Brodie J., Fabricius K., De'ath G. & Okaji K., 2005. Are increased nutrient inputs responsible for more outbreaks of crown-of-thorns starfish? An appraisal of the evidence. Marine Pollution Bulletin, 51 (1-4): 266-278.

Brodie J.E., 2005. Sources and fate of terrestrially derived nitrogen in the Great Barrier Reef . In: C.L. Goggin and T. Harvey (eds), Rainforest meets Reef Conference Abstracts. CRC Reef Research Centre Technical Report No. 64 22 - 22. CRC Reef Research Centre, Townsville.

Brodie J., Duncan I., Bainbridge Z., Post D., & Furnas M., 2005. Burdekin region Water Quality Monitoring January 2005 Event. Interim Report to the Burdekin Dry Tropics Board - July 2005. ACTFR report no. 05/01, Australian Centre for Tropical Freshwater Research, James Cook University, Townsville, 24p.

Brodie J. et al., 2005. Long term chlorophyll monitoring in the Great Barrier Reef. ACTFR report no. 05/06, Australian Centre for Tropical Freshwater Research, James Cook University, Townsville.

Brodie J., Alewijnse M. and Bainbridge Z., 2005. River Flood Plume Monitoring Off Great Barrier Reef Catchment during the 2004-2005 Wet Season, North Queensland. ACTFR report no. 05/12, Australian Centre for Tropical Freshwater Research, James Cook University, Townsville.

Devlin M. and Brodie J., 2005. Terrestrial discharge into the Great Barrier Reef Lagoon: Nutrient behaviour in coastal waters (809kb). Marine Pollution Bulletin, 51 (1-4): 9-22.

Faithful J., Brodie J., Armstrong C., Frayne P. and Bubb K., 2005. Water quality of runoff draining from pine plantation, native forest and agricultural cops in the Whitfield Creek catchment, located in the Wet Tropics of North Queensland, Australia in the 2003/2004 wet season. ACTFR report no. 05/02, Australian Centre for Tropical Freshwater Research, James Cook University, Townsville, 23p.

Faithful J., Brodie J., Hooper A., Leahy P., Henry G., Finlayson W. and Green D., 2006. Plot-Scale Runoff of nutrients and sediments under Varying Management Regimes on banana and cane farms in the Wet Tropics, Queensland , Australia . A Report to Task 1, Catchment to Reef Project. ACTFR report no. 05/03, Australian Centre for Tropical Freshwater Research, James Cook University, Townsville.

Furnas M., Mitchell A., Skuza M. and Brodie J., 2005. In the other 90 percent: phytoplankton responses to enhanced nutrient availability in the GBR lagoon. Marine Pollution Bulletin, 51 (1-4): 253-265.

Greiner R., Herr A., Brodie J. and Haynes D., 2005. A multi-criteria approach to Great Barrier Reef catchment (Queensland, Australia) risk assessment (490kb). Marine Pollution Bulletin, 51 (1-4): 128-137.

McKergow L.A., Prosser I.P., Hughes A.O. and Brodie, J., 2005. Sources of sediment to the Great Barrier Reef World Heritage Area (478kb). Marine Pollution Bulletin, 51 (1-4): 200-211.

McKergow L.A., Prosser I.P., Hughes A.O. and Brodie, J., 2005. Regional scale nutrient modelling: exports to the Great Barrier Reef World Heritage Area (384kb). Marine Pollution Bulletin, 51 (1-4): 186-199.

Mitchell C., Brodie J. and White I., 2005. Sediments, nutrients and pesticide residues in event flow conditions in streams of the Mackay Whitsunday Region, Australia (487kb). Marine Pollution Bulletin, 51 (1-4): 23-36.

Moss A., Brodie J. and Furnas M., 2005. Water Quality Guidelines for the Great Barrier Reef World Heritage Area: A basis for development and preliminary values (342kb). Marine Pollution Bulletin, 51 (1-4): 76-88.

O'Reagain P.J., Brodie J., Fraser G., Bushell J.J., Holloway C.H., Faithful J.W. and Haynes, D., 2005. Nutrient loss and water quality under extensive grazing in the upper Burdekin river catchment, North Queensland (328kb). Marine Pollution Bulletin, 51 (1-4): 37-50.

Thomas C., Hart B., Nicholson A., Grace M., Brodie J. and Pollino C., 2005. Development of criteria for simplifying ecological risk models. In: A. Zerger and R. M. Argernt (eds.). MODSIM 2005 International Congress on Modelling and Simulation. Modelling and Simulation Society of Australia and New Zealand, 772-778.

2004:

Bartley R., Hartcher M., Henderson A., Chen Y. and Brodie, J., 2004. Application of the SedNet Model to the Bowen Catchment, Queensland: assessment of sediment and nutrient loads at a sub-catchment scale under different grazing scenarios. A Report to the Burdekin Dry Tropics Board for the NAP PAP 4 Project in the Bowen Catchment. CSIRO Land and Water Client Report.

Brodie J., Faithful J. and Cullen K., 2004. Community Water Quality Monitoring in the Burdekin River Catchment and Estuary, 2002-2004. ACTFR report no. 04/15, Australian Centre for Tropical Freshwater Research, James Cook University, Townsville, 47p.

Brodie J., 2004. Mackay Whitsunday Region State of the Waterways Report 2004. ACTFR report no. 02/03, Australian Centre for Tropical Freshwater Research, James Cook University, Townsville, 161p.

Brodie JE (2004). Exposure of Great Barrier Reef Reefs to Land-Sourced Contaminants: Changes due to catchment agricultural development. In: Proceedings of the 10th International Coral Reef Symposium. International Society for Reef Studies, Japan.

Brodie JE (2004). Monitoring water quality on the Great Barrier Reef catchment with the community.In: Proceedings of Seagrass 2004 and the International Seagrass Biology Workshop (ISBW6) (eds A Calladine & M Waycott). James Cook University, Townsville

Brodie JE & Thomas C (2004).Habitat Connectivity. In: Proceedings of Seagrass 2004 and the International Seagrass Biology Workshop (ISBW6) (eds A Calladine & M Waycott). James Cook University, Townsville.

Brodie JE, Fabricius K, De'ath G & Okaji K (2004). Are increased nutrient inputs responsible for more outbreaks of Crown-of-Thorns Starfish? An appraisal of the evidence. In: Proceedings of the Catchment to Reef: Water Quality Issues in the Great Barrier Reef Region (eds D Haynes & B Schaffelke). CRC Reef Research Centre Ltd, Townsville

Devlin M & Brodie JE (2004). Flood processing of river material in Great Barrier Reef waters. In: Proceedings of the Catchment to Reef: Water Quality Issues in the Great Barrier Reef Region. (eds D Haynes & B Schaffelke). CRC Reef Research Centre Ltd, Townsville

Devlin M & Brodie JE (2004). Exposure of Great Barrier Reef Reefs to Land-Sourced Contaminants: Changes due to catchment agricultural development.In: Proceedings of the ECSA 37 ERF Conference. ECSA-ERF

Loong D., Dowe J., Brodie J., Post D. and Butler B., 2004. Riparian Case Study and Community Water Quality Monitoring in the Bowen-Broken Catchment. ACTFR Report No. 04/11, Australian Centre for Tropical Freshwater Research, James Cook University, Townsville.

2003:

Bartley R., Henderson A., Prosser I.P., Hughes A.O., McKergow L., Lu H., Brodie J., Bainbridge Z. and Roth C., 2003. Patterns of erosion and sediment and nutrient transport in the Herbert River Catchment, Queensland. CSIRO Land and Water Consultancy Report, August, 2003. 56p.

Brodie J., 2003. Ch. 13: The Great Barrier Reef: 25 years of management as a Large Marine Ecosystem. In: G. Hempel and K. Sherman (eds): Large Marine Ecosystems of the World: Trends in Exploitation, Protection, and Research'. Elsevier: Amsterdam, 313-336.

Brodie J. and Loong D., 2003. Environmental Impact and Receiving Water Monitoring Program for Coral Sea Farms of Australia, Seymour River. ACTFR report no. 03/06, Australian Centre for Tropical Freshwater Research, James Cook University, Townsville.

Brodie J., McKergow L.A., Prosser I.P., Furnas M., Hughes A.O. and Hunter H., 2003. Sources of sediment and nutrient exports to the Great Barrier Reef World Heritage Area. ACTFR report no. 03/11, Australian Centre for Tropical Freshwater Research, James Cook University, Townsville, 208p.

Brodie J. and Furnas M. J., 2003. Status of nutrients and sediment inputs from the Great Barrier Reef catchments and impacts on the reef . In: Proceedings of the 2nd National Conference on Aquatic Environments: Sustaining our aquatic environments- Implementing solutions. Queensland Department of Natural Resources and Mines, Brisbane, Australia.

Brodie J., Mitchell A., Furnas M., Haynes D., Waterhouse J., Ghonim S., Morris S., Yorkston H. and Audas D., 2003. Developing catchment pollutant load targets for the protection of the Great Barrier Reef. In: Proceedings of the 2nd National Conference on Aquatic Environments: Sustaining our aquatic environments- Implementing solutions. Queensland Department of Natural Resources and Mines, Brisbane, Australia.

Devlin M., Brodie J, Waterhouse J., Mitchell A., Audas D. and Haynes D., 2003. Exposure of Great Barrier Reef inner-shelf reefs to river-borne contaminants. In: Proceedings of the 2nd National Conference on Aquatic Environments: Sustaining our aquatic environments- Implementing solutions. Queensland Department of Natural Resources and Mines, Brisbane, Australia.

Greiner R., Herr A., Brodie J., Haynes D., Audas D. and Roth C., 2003. Profiling and assessment of basins with respect to the sediment, nutrient and other diffuse-source loads they export to the Great Barrier Reef WHA. CSIRO Sustainable Ecosystems.

2002:

Brodie J., 2004. Mackay Whitsunday Region State of the Waterways Report 2004. ACTFR report no. 02/03, Australian Centre for Tropical Freshwater Research, James Cook University, Townsville, 161p.

Brodie J., 2002. The effects of landuse on water quality in Australian north-east coastal catchments and coastal waterways. ACTFR report no. 02/07, Australian Centre for Tropical Freshwater Research, James Cook University, Townsville, 88p.

Brodie J., 2002. GBRWHA water quality monitoring program. ACTFR report no. 02/01 , Australian Centre for Tropical Freshwater Research, James Cook University, Townsville, 62p.

Brodie J.E., 2002. Keeping the wolf from the door: managing land-based threats to the Great Barrier Reef. In: Moosa et al. (eds.) Proceedings of the 9th International Coral Reef Symposium. October, 2000, Bali, Indonesia. 2, 705-714.

Devlin M., Waterhouse J. and Brodie J., 2002. Terrestrial discharge into the Great Barrier Reef: Distribution of riverwaters and pollutant concentrations during flood plumes. In: Moosa et al. (eds.) Proceedings of the 9th International Coral Reef Symposium. October, 2000, Bali, Indonesia. 2, 1205-1211.

Marshall P., Christie C., Dobbs K., Green A., Haynes D., Brodie J., Michalek-Wagner K., Smith A., Storrie J. and Turak E., 2002. Grounded ship leaves TBT-based antifoulant on the Great Barrier Reef: An overview of the environmental response. Spill Science and Technology Bulletin, 7(5-6): 215-221.

White I., Brodie J. and Mitchell C., 2002. Pioneer River catchment event based water quality sampling . Healthy Waterways Program, Mackay Whitsundays Regional Strategy Group, Mackay.

2001:

Brodie J., Christie C., Devlin M., Haynes D., Morris S., Ramsay M., Waterhouse J. and Yorkston H., 2001. Catchment management and the Great Barrier Reef. Water Science and Technology, 43(9): 203-211.

Brodie J. and Furnas M., 2001. Status of nutrient and sediment inputs from Great Barrier Reef catchments and impacts on the Reef. In: Proceedings of the 2 nd national conference on aquatic environments: sustaining our aquatic environments – implementing solutions. 20-23 November, 2001, Townsville.

Brodie J., Furnas M., Ghonim S., Haynes D., Mitchell A., Morris S., Waterhouse J., Yorkston H., Audas D., Lowe D. and Ryan M., 2001. Great Barrier Reef Catchment Water Quality Action Plan. Great Barrier Reef Marine Park Authority, Townsville, 116p.

Devlin M., Brodie J., Waterhouse J., Mitchell A., Audas D. and Haynes D., 2001. Exposure of Great Barrier Reef inner-shelf reefs to river-borne contaminants. In: 2 nd National Conference on Aquatic Environments: Sustaining Our Aquatic Environments – Implementing Solutions. 20-23 November 2001, Townsville.

Devlin M., Waterhouse J., Taylor J., and Brodie J., 2001. Flood plumes in the Great Barrier Reef: spatial and temporal patterns in composition and distribution . GBRMPA Research Publication No 68, Great Barrier Reef Marine Park Authority, Townsville, Australia.

Devlin M., Waterhouse J. and Brodie J., 2001. Community and connectivity: Summary of a community based monitoring program set up to assess the movement of nutrients and sediments into the Great Barrier Reef during high flow events. Water Science and Technology 43(9): 121-131.

Gilbert M. and Brodie J., 2001. Population and Major Land Use in the Great Barrier Reef Catchment Area: Spatial and Temporal Trends . Great Barrier Reef Marine Park Authority, Townsville, 72p.

Haynes D., Brodie J., Christie C., Devlin M., Michalek-Wagner K., Morris S., Ramsay M., Storrie J., Waterhouse J. and Yorkston H., 2001. Great Barrier Reef water quality: current issues. Great Barrier Reef Marine Park Authority, Townsville, 90p.

Koop K., Hutchings P.A., Hoegh-Guldberg O., Booth D., Brodie J., Bucher D., Coll J., Dennison W., Erdmann M., Harrison P., Jones G.B., Larkum A.W.D., O'Neil J., Steven A., Tentori T., Ward S. and Yellowlees D., 2001. ENCORE: The effects of nutrient enrichment on coral reefs. Synthesis of results and conclusions. Marine Pollution Bulletin 42(2): 91-120.

Loong D., Faithful J., and Brodie J., 2001. An assessment of potential water quality impacts by motorized watercraft in Ross River Dam: a literature review. ACTFR report no. 01/09, Australian Centre for Tropical Freshwater Research, James Cook University, Townsville.

1999:

Brodie, J.E.,1999. Management of the Great Barrier Reef as a Large Marine Ecosystem. In: K. Sherman & Q. Tang (eds) Large Marine Ecosystems of the Pacific Rim . Blackwell Science, Malden. p. 428-437.

1998:

Turak E. and Brodie J., 1998. Coral and Reef Habitats. Chapter 2. In: A. DouAbal et al. (eds) Protection of Marine Ecosystems of the Red Sea Coast of Yemen. UN Publication, 17-39.

Rouphael T., Turak E. and Brodie J., 1998. Seagrasses and Mangroves of Yemen's Red Sea. Chapter 3. In: A. DouAbal et al. (eds) Protection of Marine Ecosystems of the Red Sea Coast of Yemen. UN Publication, 41-49.

Brodie J., Al-Sorimi M. and Turak E., 1998. Fish and Fisheries of Yemen's Red Sea. Chapter 4. In: A. DouAbal et al. (eds) Protection of Marine Ecosystems of the Red Sea Coast of Yemen. UN Publication, 51-71.

Brodie J. and Turak E., 1998. Threats to Marine Organisms and Habitats of Yemen's Red Sea. Chapter 5. In: A. DouAbal et al. (eds) Protection of Marine Ecosystems of the Red Sea Coast of Yemen. UN Publication, 73-89.

1997:

Brodie J.E., Furnas M., Steven A.D.L., Trott L.A., Pantus F. and Wright M., 1997. Monitoring chlorophyll in the Great Barrier Reef Lagoon: Trends & variability. In: Proceedings 8th International Coral Reef Symposium 1: 797-802.

Chiswell R.K., Jones G.B. and Brodie J., 1997. Investigations of the speciation of phosphorus in coastal and estuarine waters of the Great Barrier Reef, using iron strips and colorimetry. Marine & Freshwater Research 48: 287-293.

Brodie J.E., 1997. Nutrients in the Great Barrier Reef Region. In: P. Cosser (ed.) Nutrients in Marine and Estuarine Environments. Australia: State of the Environment Technical Paper Series (Estuaries and the Sea). Environment Australia, Canberra, 7-28.

Selected publications pre-1997

Ash, J., Brodie, J.E., Southern, W. and Ryan, P. 1986. The flora, fauna and water chemistry of Tagimaucia Crater. A tropical highland lake and swamp in Fiji. Freshwater Biology, 16, 509-520.

Brodie, J.E., Hicks, W.S., Richards, G.N. and Thomas, F.G. 1984. Residues related to agricultural chemicals in the groundwater of the Burdekin River Delta, North Queensland. Environmental Pollution (Series B), 8, 187-215.

Brodie, J.E. and Morrison, R.J. 1984.The management and disposal of hazardous wastes in the Pacific Islands. Ambio, 13, 331-333.

Brodie, G.D. and Brodie, J.E. 1990. A checklist of opisthobranch molluscs of Fiji. J. Malacological Society Australia 11, 53-63.

Brodie, J.E., Arnold, C., Eldredge, L., Hammond, L., Holthus, P., Mowbray, D. and Tortell, P. 1990. State of the marine environment in the South Pacific region. UNEP Regional Seas Reports and Studies No. 127. UNEP, Nairobi. 59p.

Brodie, J.E. 1991. Urban impact on the Great Barrier Reef. In: Land Use Patterns and Nutrient Loading of the Great Barrier Reef Region, James Cook University, Townsville. pp 18-26.

Brodie, J.E. 1992. Enhancement of larval and juvenile survival and recruitment in Acanthaster planci from the effects of terrestrial runoff - a review. Australian Journal of Marine and Freshwater Research, 43, 539-554.

Brodie, J.E. and Mitchell, A. 1992. Nutrient composition of the January 1991 Fitzroy River plume. In: Workshop on the Impacts of Flooding, GBRMPA Workshop Series No. 17, GBRMPA, Townsville. pp 56-74.

Brodie, J. and Furnas, M. 1992. Long term monitoring programs for eutrophication and the design of a monitoring program for the Great Barrier Reef. Proceedings Seventh International Coral Reef Symposium, Guam, 1, 77-84.

Brodie, G.D. and Brodie, J.E.. 1995. Species diversity and habitat selection in opisthobranch gastropods on two adjacent reefs in Fiji. South Pacific Journal of Natural Science, 14, 97 – 113.

Brodie, J.E. 1995. River flood plumes in the Great Barrier Reef lagoon. In: Great Barrier Reef: Terrigenous Sediment Flux and Human Impacts. Reef Research CRC Workshop Report, Reef Research CRC, Townsville.

Brodie, J.E. 1995. Nutrients and eutrophication in the Australian marine environment. In: Zann, L. and Sutton, D.C. (eds) The State of the Marine Environment Report for Australia, Technical Annex 2, DEST Report, Canberra. p. 1 –29.

Brodie, J.E., Furnas, M., Steven, A.D.L., Trott, L.A., Pantus, F. & Wright, M. 1996. Monitoring chlorophyll in the Great Barrier Reef Lagoon: Trends & variability. Proceedings 8th International Coral Reef Symposium, Panama. 1, 797 - 802.

Brodie, J. & Furnas, M. 1996. Cyclones, river flood plumes and natural water quality extremes in the central Great Barrier Reef. In: Hunter, H. M. et al (eds) Proceedings of the Conference on the Downstream Effects of Land Use, 26-28 April, 1995, Rockhampton, pp 367 - 374.

Furnas, M. & Brodie, J. 1996. Current status of nutrient levels and other water quality parameters in the Great Barrier Reef. In: Hunter, H. M. et al (eds) Proceedings of the Conference on the Downstream Effects of Land Use, 26-28 April, 1995, Rockhampton, pp 9 – 21.

Naidu, S., Brodie, J.E., Aalbersberg, W.G.L., Fuavao, V.A., Maata, M., Naqasima, M., Whippy, P. and Morrison, R.J. 1991. Water quality studies on selected South Pacific lagoons. UNEP Regional Seas Reports and Studies No. 136, UNEP, Nairobi.

Steven, A., Devlin, M., Brodie, J., Baer, M. & Lourey, M. 1996. Spatial influence and composition of river plumes in the central Great Barrier Reef. In: Hunter, H. M. et al (eds) Proceedings of the Conference on the Downstream Effects of Land Use, 26-28 April, 1995, Rockhampton, pp 85 - 92.

Zann, L., Brodie, J.E., Berryman, C. and Naqasima, M. 1987. Recruitment, ecology, growth and behaviour of juvenile Acanthaster planci (L). Bulletin of Marine Science, 41, 561-575.

Zann, L.P., Brodie, J. and Vuki, V. 1990. History and dynamics of the crown-of-thorns starfish, Acanthaster planci (L.) in the Suva area, Fiji. Coral Reefs, 9, 135-144.